In order to automatically classify molecules using this application, it is necessary to deliver a molecule, or structure, to the protocol. This can be done in a variety of ways seen below:
1. SD File - This form protocol provides a user interface that allows the user to browse to an SD file (or group of SD files) of chemical structures. Note: This is the only Input method, at the present time that is available for the Fee for Service Pricing Models.
2. Sketcher - This form protocol allows the user input a structure by opening an instance of SymyxDraw (or IsisDraw or AccordDraw), drawing a query molecule and transferring it to the protocol.
3. Identifiers - trivial names or internal or external identifiers can be used as input.